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  (#26)
PantherX
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Default 09-12-2010, 15:00 | posts: 1,357

Update for PS3 Servers:
Quote:
We have been working on vspg5v (PS3 server). Should be back up soon.

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  (#27)
PantherX
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Default 09-13-2010, 22:49 | posts: 1,357

A possible disease that may be researched by F@H:
Quote:
A new link between Autism and protein folding

Just a short post: I thought this story would be of interest to the FAH community.
http://www.sciencedaily.com/releases...0910142751.htm
We're keeping our eye on this system for possible future FAH projects.


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  (#28)
PantherX
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Default 09-14-2010, 21:35 | posts: 1,357

There was initially a problem with some GPU3 WUs Gen 44 but that has been fixed:
Quote:
Originally Posted by yslin
Hi,

The gen44 problem for p10927-10978 and p11214-11265 should be fixed now. Please let us know if you're still seeing it. Thank you so much!


yslin

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  (#29)
PantherX
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Default 09-14-2010, 22:21 | posts: 1,357

For GPU3 BETA Client:
Quote:
Originally Posted by yslin
Hi,

New GPU3 projects 11161-11167 are entering the advanced stage of testing (restricted to non-Fermi boards).

These Amyloid beta peptide simulations will serve as tests to evaluate the performance of a new core (openmm-gromacs) on gpu with Generalized Born (GB) model used as implicit solvent.

Points and deadlines:
project 11161: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11162: 1358 points, preferred deadline 20 days, final deadline 29 days
project 11163: 1349 points, preferred deadline 20 days, final deadline 29 days
project 11164: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11165: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11166: 1241 points, preferred deadline 19 days, final deadline 27 days

Thanks!

yslin

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For the Classic Client:
Quote:
Originally Posted by yslin
New projects p11266-11286 are entering the advanced stage of testing.

These are classic gromacs jobs serving as test simulations of a single full-length amyloid beta (Abeta) monomer in water with different lengths, mutations and box sizes.

Points and deadlines info:
project 11266-11272: 69 points, preferred deadline 14 days, final deadline 21 days
project 11273-11279: 209 points, preferred deadline 40 days, final deadline 59 days
project 11280-11286: 145 points, preferred deadline 28 days, final deadline 41 days

Thanks!

yslin

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  (#30)
PantherX
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Default 09-22-2010, 19:18 | posts: 1,357

There was recently an issue with PS3 Servers, here is an update:

Quote:
Originally Posted by VijayPande
We did some clean up on vspg1v2 (PS3 server). Should be back up and serving now.
   
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  (#31)
PantherX
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Default 09-29-2010, 22:34 | posts: 1,357

New GPU2 Project that uses FahCore_11 and runs on Non-Fermi GPUs with -advmethods flag:
Quote:
Originally Posted by gbowman
This GPU2 project for nvidia GPUs is the beginning of a study on how ubiquitin folds.

Points: 494
Timeout: 2 days
Deadline: 3 days

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  (#32)
PantherX
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Default 10-01-2010, 15:02 | posts: 1,357

New GPU2 Project that uses FahCore_11 and runs on Non-Fermi GPUs released to public:
Quote:
Originally Posted by gbowman
This GPU2 project for nvidia GPUs is the beginning of a study on how ubiquitin folds.

Points: 494
Timeout: 2 days
Deadline: 3 days

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  (#33)
PantherX
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Default 10-01-2010, 16:08 | posts: 1,357

Today is a big day for the F@H Project as it is its 10th anniversary:
Quote:
Folding@home 10th anniversary

It’s with great pleasure that I announce that today is Folding@home’s official tenth anniversary. It’s been an amazing 10 years, especially in terms of what we’ve collectively been able to do, and my team and I are grateful for all the contributions by millions of people that has made this possible. If you’re curious to see what we’ve done so far, please check out our Results section or Diseases FAQ. In particular, we're very excited about recent work on protein folding, which could radically reshape how people think about folding (leading to recent awards).
Behind the scenes, we’ve been planning some 10 year celebration activities, including a new client, better client software feedback of what’s going on, some new client surprises through new collaborations, new backend software, and enhanced science via new cores. We’re also pushing to support more hardware, such as new support for OpenCL on ATI hardware (an ATI OpenMM/OpenCL core16 is in internal testing, although it requires the v7 client).
One key big picture goal for this year is our push to try to make FAH much easier, interesting, and fun to use by donors. With a new server backend soon to be in place, we should be ready to scale to much higher levels and we’re excited about what we can do with the combination of a new client that’s easier to run, much more stable backend, and new science in cores A3, A4, 15, and 16.
Finally, amongst some of the surprises are new initiatives that I hope will change how people think about distributed computing. That’s clearly a lot to hope for, but that’s our goal. Sorry for being so coy about this now, but I wanted to let people know there’s a lot going on behind the scenes and we’ll be talking about this more as we announce these initiatives throughout the year.

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  (#34)
PantherX
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Default 10-02-2010, 13:26 | posts: 1,357

These WUs are for the Classic Client and have been released to public:
Quote:
Originally Posted by yslin
Projects p11266-11287 are now on fah.

These are classic gromacs jobs serving as test simulations of a single full-length amyloid beta (Abeta) monomer in water with different lengths, mutations and box sizes.

Points and deadlines info:
project 11266-11272: 69 points, preferred deadline 14 days, final deadline 21 days
project 11273-11279: 209 points, preferred deadline 40 days, final deadline 59 days
project 11280-11286: 145 points, preferred deadline 28 days, final deadline 41 days
project 11287: 69 points, preferred deadline 14 days, final deadline 21 days

Thanks!

yslin

Source
These GPU3 WUs for Fermi GPUs have been released to public:
Quote:
Originally Posted by yslin
Hi,

GPU3 projects 10927-10978 and 11214-11265 are now on full fah (restricted to Fermi boards).

Projects 10927-10978 are the Protein-G peptide simulations and projects 11214-11265 are the Fs peptide simulations. These are to evaluate the performance of a new core (openmm-gromacs) on Fermi boards with Generalized Born (GB) model used as implicit solvent. Different force fields and different inner dielectric constants are used for this set of simulations.

10927-10978 Points and deadlines: 925 points, preferred deadline 14 days, final deadline 20 days
11214-11265 Points and deadlines: 912 points, preferred deadline 14 days, final deadline 20 days

Thanks!

yslin

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  (#35)
PantherX
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Default 10-04-2010, 20:06 | posts: 1,357

New Projects on -advmethods for Classic Clients running Windows 32bit:
Quote:
Originally Posted by kyleb
This project is the first of several that study how the Villin headpiece folds in various experimental conditions.

194 Points
13 day Timeout
19 day Deadline

Win32 only

This project uses the new A4 core that has recently finished several rounds of testing. This core is based on the recently released (http://www.gromacs.org/Downloads) 4.5.1 version of Gromacs.

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  (#36)
Athlonite
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Default 10-07-2010, 06:59 | posts: 1,108 | Location: Hawkes Bay

Any new news on when GPU3 will be ready for AMD/ATI am getting tired of waiting and wasting GPU cycles


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  (#37)
Kaktus
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Default 10-07-2010, 19:21 | posts: 309 | Location: South Africa

Quote:
Originally Posted by Athlonite View Post
Any new news on when GPU3 will be ready for AMD/ATI am getting tired of waiting and wasting GPU cycles
+1
   
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  (#38)
PantherX
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Default 10-07-2010, 19:30 | posts: 1,357

Well, the only mention that I can find is this:
Quote:
...such as new support for OpenCL on ATI hardware (an ATI OpenMM/OpenCL core16 is in internal testing, although it requires the v7 client)....

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  (#39)
PantherX
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Default 10-10-2010, 18:48 | posts: 1,357

Here is an interesting update on the SMP Server situation:
Quote:
Originally Posted by VijayPande
We're working on this on several fronts: new SMP WUs to go onto other servers to spread the load and an improved WS software to handle the load better. Both are moving to resolve this issue, but are taking longer than we expected. I hope that several PG members will be beta testing new SMP WUs shortly (hopefully later this week). Once they're through the QA process, the load will get *a lot* better on this server. Also, the new WUs will likely run off of the new WS software, which should help too (the new WS has code to specifically handle the situation when the # of connections saturates).

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  (#40)
PantherX
Folding@Home Team Leader
 
Videocard: Dual ASUS Turbo GTX 1070
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PSU: ST75F-GS 850Watts
Default 10-12-2010, 05:18 | posts: 1,357

GPU3 Projects (FahCore_15) for Non-Fermi are now available to public:
Quote:
Originally Posted by yslin
Hi,

New GPU3 projects 11161-11168 are now on full fah (restricted to non-Fermi boards).

These Amyloid beta peptide simulations will serve as tests to evaluate the performance of a new core (openmm-gromacs) on gpu with Generalized Born (GB) model used as implicit solvent.

Points and deadlines:
project 11161: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11162: 1358 points, preferred deadline 20 days, final deadline 29 days
project 11163: 1349 points, preferred deadline 20 days, final deadline 29 days
project 11164: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11165: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11166: 1241 points, preferred deadline 19 days, final deadline 27 days
project 11167: 1358 points, preferred deadline 20 days, final deadline 29 days
project 11168: 1352 points, preferred deadline 20 days, final deadline 29 days

Thanks!

yslin

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GPU3 Projects (FahCore_15) for Non-Fermi are now available to F@h Donors using -advmethods flag:
Quote:
Originally Posted by yslin
Hi,

New GPU3 projects 11169-11181 (restricted to non-Fermi boards) are on adv. They are Amyloid beta peptide simulations and will be used to evaluate the performance of a new core (openmm-gromacs) on gpu with Generalized Born (GB) model used as implicit solvent.

Points and deadlines:
project 11169: 1358 points, preferred deadline 20 days, final deadline 29 days
project 11170: 1349 points, preferred deadline 20 days, final deadline 29 days
project 11171: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11172: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11173: 1241 points, preferred deadline 19 days, final deadline 27 days
project 11174: 1358 points, preferred deadline 20 days, final deadline 29 days
project 11175: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11176: 1358 points, preferred deadline 20 days, final deadline 29 days
project 11177: 1349 points, preferred deadline 20 days, final deadline 29 days
project 11178: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11179: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11180: 1241 points, preferred deadline 19 days, final deadline 27 days
project 11181: 1358 points, preferred deadline 20 days, final deadline 29 days

Thanks!

yslin

Source
New Classic Project (FahCore_a4) for Windows 32 bit is now available to public:
Quote:
Originally Posted by kyleb
This project is the first of several that study how the Villin headpiece folds in various experimental conditions. We plan on making very direct comparisons to a number of high-resolution kinetic experiments that were recently published. To do so, we need to examine Villin at several temperatures and with several concentations of denaturant. This first simulation is a control, performed at 300K with no denaturant.

194 Points
13 day Timeout
19 day Deadline

Win32 only

This project uses the new A4 core that has recently finished several rounds of testing. This core is based on the recently released (http://www.gromacs.org/Downloads) 4.5.1 version of Gromacs.

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  (#41)
Athlonite
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Default 10-12-2010, 10:24 | posts: 1,108 | Location: Hawkes Bay

Quote:
Originally Posted by PantherX View Post
Well, the only mention that I can find is this:
so in other words look for this coming out sometime in the next 2 years hrrrm I wish AMD/ATI would be a bit more helpful like nvidia was


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  (#42)
PantherX
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Default 10-15-2010, 14:18 | posts: 1,357

From Prof. Vijay's Blog: (Interested users can check out the video)
Quote:
Recent talk of results from Folding@home

Donors are often curious to hear about recent results. While one can read our papers, listed on our web site, those are fairly technical and intended for a biological or biophysical audience. The talk I gave at GTC 2010 ("Folding@home: Petaflops on the cheap today, exaflops soon?") was intended for a computational audience, so it may be more approachable than the papers, especially for those more familiar with the computational side of FAH, rather than the biological. You can see it here.
I talk a bit about how FAH works and some recent results in protein folding (pushing past the millisecond timescale), protein misfolding disease (Alzheimer's) and viral infection. If you're curious about how FAH works or what we've done recently, this might be of interest to you.


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New GPU3 (FahCore_15) Projects for Non-Fermi GPUs now for public:
Quote:
Originally Posted by yslin
Hi,

GPU3 projects 11169-11181 (restricted to non-Fermi boards) are now on fah. They are Amyloid beta peptide simulations and will be used to evaluate the performance of a new core (openmm-gromacs) on gpu with Generalized Born (GB) model used as implicit solvent.

Points and deadlines:
project 11169: 1358 points, preferred deadline 20 days, final deadline 29 days
project 11170: 1349 points, preferred deadline 20 days, final deadline 29 days
project 11171: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11172: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11173: 1241 points, preferred deadline 19 days, final deadline 27 days
project 11174: 1358 points, preferred deadline 20 days, final deadline 29 days
project 11175: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11176: 1358 points, preferred deadline 20 days, final deadline 29 days
project 11177: 1349 points, preferred deadline 20 days, final deadline 29 days
project 11178: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11179: 1352 points, preferred deadline 20 days, final deadline 29 days
project 11180: 1241 points, preferred deadline 19 days, final deadline 27 days
project 11181: 1358 points, preferred deadline 20 days, final deadline 29 days

Thanks!

yslin


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  (#43)
PantherX
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Default 10-19-2010, 17:20 | posts: 1,357

It seems we have some very interesting F@H updates. First, the Bonus Points (QRB) will be implemented in the Classic Client:
Quote:
Originally Posted by VijayPande
...1) We have a plan to bring more PPD to classic clients by implementing the QRB into classic clients. This aligns points with the science (which is good for everyone) and gives classic donors more PPD for helping the science further. A "win-win". This will come with a more complete rollout of the v6 WS and is under testing right now...

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Secondly, there is some very good news for the ATI Users:
Quote:
Originally Posted by VijayPande
...5) ATI deprecated their GPU language, Brook, in favor of OpenCL. So, we were forced to completely rewrite our GPU core for ATI in openCL. This takes time, especially to write highly optimized code. We have been internally testing this and expect to start beta testing it shortly (days to weeks). It will require client changes that are now built into the v7 client...

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Finally, we have some good news for v7 of the F@h Client:
Quote:
Originally Posted by VijayPande
...3) The v7 client is going through close Alpha testing. I have kept it there (rather than an open beta) since I want it to be in fairly good shape before the rest of the world sees it. It has gone a long way even in the last few weeks. It's hard to be sure when it's ready, but I expect we'll have something by the end of the year, perhaps a bit sooner...

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  (#44)
iancook221188
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Default 10-19-2010, 17:46 | posts: 1,716 | Location: uk

wow that was a good update finaly with the ati and the v7 clinet is near that even better lol
   
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  (#45)
PantherX
Folding@Home Team Leader
 
Videocard: Dual ASUS Turbo GTX 1070
Processor: Core i7-6700K @ 4.6 {1.4}
Mainboard: ROG Maximus VIII Formula
Memory: 32 GiB @ DDR4-2,700 MHz
Soundcard: ASUS Maximus VIII Formula
PSU: ST75F-GS 850Watts
Default 10-20-2010, 17:28 | posts: 1,357

New Project for Nvidia GPU Using FahCore_11 is now available for public:
Quote:
Originally Posted by gbowman
project 10111 for nvidia gpus and the gpu2 core is now on FAH

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  (#46)
PantherX
Folding@Home Team Leader
 
Videocard: Dual ASUS Turbo GTX 1070
Processor: Core i7-6700K @ 4.6 {1.4}
Mainboard: ROG Maximus VIII Formula
Memory: 32 GiB @ DDR4-2,700 MHz
Soundcard: ASUS Maximus VIII Formula
PSU: ST75F-GS 850Watts
Default 10-26-2010, 06:29 | posts: 1,357

Project 10200 is for Classic Client which is available through -advmethods flag:
Quote:
Originally Posted by gbowman
...10200 is single core a4

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  (#47)
PantherX
Folding@Home Team Leader
 
Videocard: Dual ASUS Turbo GTX 1070
Processor: Core i7-6700K @ 4.6 {1.4}
Mainboard: ROG Maximus VIII Formula
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Soundcard: ASUS Maximus VIII Formula
PSU: ST75F-GS 850Watts
Default 10-28-2010, 02:23 | posts: 1,357

This update is regarding Classic Clients Systray Version only:
Quote:
Originally Posted by VijayPande
Joe found a protomol issue with the Windows systray client that has been causing problems for people. This problem is fixed in v7, but not in v6. So, to keep this issue from donors, we will keep protomol away from Windows systray clients in 2 stages:
1) now: Linux only
2) shortly (~Wed): Linux + Windows (not systray). We need to make AS changes to handle this specific restrict.

Source
GPU3 WUs for Fermi GPU using -advmethods flag:
Quote:
Originally Posted by yslin
Hi,

Vsp05b has been upgraded and we are testing the new work server code. GPU3 projects 10927-10978 and 11214-11265 (restricted to Fermi boards) will soon be back on adv.

yslin

Points and deadlines:
P10927-10978: 925 points, preferred deadline 14 days, final deadline 20 days
P11214-11265: 912 points, preferred deadline 14 days, final deadline 20 days

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  (#48)
PantherX
Folding@Home Team Leader
 
Videocard: Dual ASUS Turbo GTX 1070
Processor: Core i7-6700K @ 4.6 {1.4}
Mainboard: ROG Maximus VIII Formula
Memory: 32 GiB @ DDR4-2,700 MHz
Soundcard: ASUS Maximus VIII Formula
PSU: ST75F-GS 850Watts
Default 11-01-2010, 18:04 | posts: 1,357

For Classic Client (FahCore_a4) without any flags:
Quote:
Originally Posted by gbowman
project 10200 (a single core project) is now available to all of FAH

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Old
  (#49)
PantherX
Folding@Home Team Leader
 
Videocard: Dual ASUS Turbo GTX 1070
Processor: Core i7-6700K @ 4.6 {1.4}
Mainboard: ROG Maximus VIII Formula
Memory: 32 GiB @ DDR4-2,700 MHz
Soundcard: ASUS Maximus VIII Formula
PSU: ST75F-GS 850Watts
Default 11-02-2010, 04:16 | posts: 1,357

F@H Servers are being updated:
Quote:
Originally Posted by yslin
Hi,

Vsp05c will be off AS temporarily for WS upgrade. The time the upgrade will take is estimated to be a day or two. We will do our best to have vsp05c back online asap and thank you for your patience .


yslin

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  (#50)
PantherX
Folding@Home Team Leader
 
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Processor: Core i7-6700K @ 4.6 {1.4}
Mainboard: ROG Maximus VIII Formula
Memory: 32 GiB @ DDR4-2,700 MHz
Soundcard: ASUS Maximus VIII Formula
PSU: ST75F-GS 850Watts
Default 11-02-2010, 20:48 | posts: 1,357

F@H Server is back online:
Quote:
Originally Posted by yslin
Hi,

Vsp05c has been upgraded and back on AS.


Thanks,

yslin

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